STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARSAArylsulfatase A. (548 aa)    
Predicted Functional Partners:
SUMF1
Formylglycine-generating enzyme.
  
 0.859
SUMF2
Sulfatase-modifying factor 2 isoform X1.
  
 0.747
MED6
Mediator of RNA polymerase II transcription subunit 6.
    
 
 0.667
MED7
Mediator of RNA polymerase II transcription subunit 7.
    
 
 0.656
MED31
Mediator of RNA polymerase II transcription subunit 31.
    
 
 0.636
GALNS
Adenine phosphoribosyltransferase.
  
0.627
MED10
Mediator of RNA polymerase II transcription subunit 10.
    
 
 0.596
GUSB
Beta-glucuronidase.
  
 
 0.590
MED17
Mediator of RNA polymerase II transcription subunit 17.
    
 
 0.587
MED14
LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 14.
    
 
 0.577
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.