STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXA6Homeobox protein HoxA/B/C6. (240 aa)    
Predicted Functional Partners:
HOXC4
Homeobox protein Hox-C4 isoform X1.
   
 
0.738
HOXB5
LOW QUALITY PROTEIN: homeobox protein Hox-B5.
   
 
0.692
HOXA7
Homeobox protein HoxA/B7.
   
 
0.688
HOXB7
Homeobox protein HoxA/B7.
   
 
0.666
HOXB6
Homeobox protein HoxA/B/C6.
  
 
0.628
HOXB4
Homeobox protein HoxA/B/C/D4.
   
 
0.628
HOXC5
Homeobox protein HoxA/B/C5.
   
 
0.601
HOXC6
LOW QUALITY PROTEIN: homeobox protein Hox-C6-like.
   
  
0.600
HOXD3
Homeobox protein HoxA/B/D3.
   
  
0.600
HOXD4
Homeobox protein HoxA/B/C/D4.
    
 
0.577
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.