STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXG1LOW QUALITY PROTEIN: forkhead box protein G1. (151 aa)    
Predicted Functional Partners:
SRF
Serum response factor isoform X1.
   
 
 0.749
ATG7
Ubiquitin-like modifier-activating enzyme ATG7 isoform X1.
   
 0.713
SIRT1
LOW QUALITY PROTEIN: NAD-dependent protein deacetylase sirtuin-1.
    
 0.692
MECP2
Methyl CpG binding protein 2.
    
 0.683
FOXD1
Forkhead box protein D1.
 
 
  
 0.683
PAX6
Paired box protein Pax-6 isoform X1.
   
 0.677
TBR1
T-box brain protein 1.
   
 
 0.665
EMX1
Homeobox protein EMX1.
   
 0.658
PPARGC1A
Peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1.
    
 0.644
TLE1
Transducin-like enhancer protein 1 isoform X1.
    
 
 0.642
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.