STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOX4TOX high mobility group box family member 4 isoform X1. (762 aa)    
Predicted Functional Partners:
SUPT16H
FACT complex subunit SPT16.
   
 0.635
ACTR8
Actin-related protein 8.
    
 0.607
GTF2H1
LOW QUALITY PROTEIN: general transcription factor IIH subunit 1.
    
 0.575
ACTR5
Actin-related protein 5 isoform X1.
    
 0.574
GIGYF2
GRB10 interacting GYF protein 2.
   
  
 0.571
CHD8
Chromodomain helicase DNA binding protein 8.
    
 0.568
ERCC3
TFIIH basal transcription factor complex helicase XPB subunit isoform X1.
   
 0.567
ENSPCIP00000007188
annotation not available
    
 0.566
GTF2H3
General transcription factor IIH subunit 3 isoform X1.
    
 0.561
GTF2H2
General transcription factor IIH subunit 2 isoform X1.
   
 0.543
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.