STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000045557annotation not available (949 aa)    
Predicted Functional Partners:
ENSPCIP00000046432
annotation not available
   
 
 0.946
AUP1
Ancient ubiquitous protein 1.
    
 
 0.936
SYVN1
Synoviolin 1.
    
 
 0.779
AMFR
E3 ubiquitin-protein ligase AMFR isoform X1.
    
 
 0.779
UBA6
Ubiquitin-like modifier-activating enzyme 6 isoform X1.
    
 0.764
UBA7
LOW QUALITY PROTEIN: ubiquitin-like modifier-activating enzyme 7.
    
 0.764
UBA1
Ubiquitin-like modifier-activating enzyme 1.
    
 0.764
EMC3
ER membrane protein complex subunit 3.
    
 
 0.758
CNOT2
CCR4-NOT transcription complex subunit 2 isoform X1.
    
 
 0.751
UBC
LOW QUALITY PROTEIN: polyubiquitin-C.
    
 0.739
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.