STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX19LOW QUALITY PROTEIN: sorting nexin-19. (372 aa)    
Predicted Functional Partners:
PPT2
Palmitoyl-protein thioesterase.
      
 0.573
CHRNA1
Nicotinic acetylcholine receptor alpha-1.
      
 0.571
TBX5
T-box transcription factor TBX5 isoform X1.
      
 0.560
BBS9
Bardet-Biedl syndrome 9 protein.
      
 0.557
STARD3NL
MLN64 N-terminal domain homolog.
      
 0.554
KIFAP3
Kinesin-associated protein 3 isoform X1.
     
 0.458
ZNF513
LOW QUALITY PROTEIN: zinc finger protein 513.
      
 0.429
CEP164
Centrosomal protein of 164 kDa isoform X1.
     
 0.422
HORMAD2
HORMA domain containing 2.
      
 0.420
COL1A1
Collagen alpha-1(I) chain.
     
 0.418
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.