STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PET117Protein PET117 homolog, mitochondrial. (177 aa)    
Predicted Functional Partners:
COX17
Cytochrome c oxidase assembly protein subunit 17.
   
  
 0.734
ENSPCIP00000026394
annotation not available
   
  
 0.720
ENSPCIP00000038430
annotation not available
    
 
 0.718
COA5
Cytochrome c oxidase assembly factor 5.
   
  
 0.670
COX11
Cytochrome c oxidase assembly protein COX11, mitochondrial.
    
 
 0.600
PNKD
Paroxysmal nonkinesiogenic dyskinesia protein.
      
 0.563
BOLA1
BolA-like protein 1.
      
 0.558
GTPBP8
GTP-binding protein 8.
      
 0.558
SURF1
Surfeit locus 1 family protein.
      
 0.477
CLCC1
Chloride channel CLIC-like protein 1 isoform X1.
      
 0.477
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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