STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C6orf62Uncharacterized protein C6orf62 homolog. (229 aa)    
Predicted Functional Partners:
PPP1CB
Serine/threonine-protein phosphatase PP1-beta catalytic subunit.
   
    0.557
TAF6
Transcription initiation factor TFIID subunit 6 isoform X1.
      
 0.509
TRIP6
LOW QUALITY PROTEIN: thyroid receptor-interacting protein 6.
      
 0.509
CIART
Circadian associated repressor of transcription.
      
 0.489
KIF2C
Kinesin family member 2/24.
      
 0.461
TDP2
tyrosyl-DNA phosphodiesterase 2.
 
    
 0.427
SLC3A2
4F2 cell-surface antigen heavy chain isoform X1.
      
 0.422
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.