STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM55Tripartite motif-containing protein 55 isoform X1. (535 aa)    
Predicted Functional Partners:
PNRC1
Proline-rich nuclear receptor coactivator 1.
      
 0.546
BBOX1
Gamma-butyrobetaine dioxygenase.
      
 0.499
ANO5
Anoctamin-5 isoform X1.
   
  
 0.435
TICAM2
TIR domain-containing adapter molecule 2.
      
 0.429
TMED7
Transmembrane emp24 domain-containing protein 7.
      
 0.429
NBR1
Next to BRCA1 gene 1 protein isoform X1.
    
 0.417
KLHL23
Kelch-like protein 23 isoform X1.
    
 
 0.410
APBB3
Amyloid beta A4 precursor protein-binding family B member 3-like isoform X1.
    
 0.401
ENSPCIP00000027748
annotation not available
    
 0.401
UBC
LOW QUALITY PROTEIN: polyubiquitin-C.
   
 0.400
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.