STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRATCarnitine O-acetyltransferase isoform X1. (781 aa)    
Predicted Functional Partners:
SLC18A3
Vesicular acetylcholine transporter.
 
 
  
 0.858
SCP2
Non-specific lipid-transfer protein.
   
 0.824
ENSPCIP00000036701
Malate synthase, glyoxysomal-like isoform X1.
   
  
 0.819
ENSPCIP00000009438
Hydroxyacyl-thioester dehydratase type 2, mitochondrial-like.
   
 0.781
ENSPCIP00000023277
annotation not available
   
 0.781
SLC25A20
Solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29.
   
 
 0.780
HSDL2
Hydroxysteroid dehydrogenase-like protein 2 isoform X1.
   
 0.712
ENSPCIP00000043383
annotation not available
   
 0.712
ACOX1
Peroxisomal acyl-coenzyme A oxidase 1 isoform X1.
   
 0.654
ACOX2
3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA 24-hydroxylase.
   
 0.651
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.