STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNE1LOW QUALITY PROTEIN: nesprin-1. (1560 aa)    
Predicted Functional Partners:
ENSPCIP00000054160
annotation not available
 
     0.935
ENSPCIP00000036548
annotation not available
 
     0.933
ENSPCIP00000050262
annotation not available
 
     0.931
SUN1
Sad1 and UNC84 domain containing 1.
    
 0.887
ENSPCIP00000049772
annotation not available
    
 0.824
LMNA
Lamin A/C.
    
 0.590
ENY2
Enhancer of yellow 2 transcription factor.
    
 0.541
ITSN2
Intersectin-2.
    
 0.493
ENSPCIP00000017340
SUN domain-containing protein 3-like isoform X1.
    
 0.489
TRRAP
LOW QUALITY PROTEIN: transformation/transcription domain-associated protein.
    
 0.485
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.