STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CALHM2Calcium homeostasis modulator protein 2. (323 aa)    
Predicted Functional Partners:
ENSPCIP00000034116
Transmembrane and coiled-coil domain-containing protein 5B-like.
   
    0.698
C1orf109
Uncharacterized protein C1orf109 homolog.
   
    0.631
SLCO1A2
Solute carrier organic anion transporter family member 1A2.
   
    0.620
LIX1
LOW QUALITY PROTEIN: protein limb expression 1 homolog.
   
    0.561
RUBCNL
Protein RUBCNL-like isoform X1.
   
    0.540
PGM2
Phosphoglucomutase / phosphopentomutase.
   
    0.530
LIX1L
LIX1-like protein isoform X1.
   
    0.493
CWC25
Pre-mRNA-splicing factor CWC25 homolog.
   
    0.457
ENSPCIP00000040571
annotation not available
   
    0.457
ENSPCIP00000031052
Nephrocan-like.
   
    0.446
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.