STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000047284annotation not available (254 aa)    
Predicted Functional Partners:
POLR2B
DNA-directed RNA polymerase II subunit RPB2.
    
 0.680
AFF4
AF4/FMR2 family member 4.
    
 0.664
EAF2
ELL-associated factor 2.
  
 
0.644
POLR2C
DNA-directed RNA polymerase II subunit RPB3.
    
 0.611
ENSPCIP00000039896
annotation not available
    
 0.605
POLR2I
DNA-directed RNA polymerase II subunit RPB9 isoform X1.
    
 0.605
ELL2
RNA polymerase II elongation factor ELL2.
    
 0.597
ELL3
Elongation factor for RNA polymerase II 3.
    
 0.597
ELL
RNA polymerase II elongation factor ELL.
    
 0.597
SUPT5H
LOW QUALITY PROTEIN: transcription elongation factor SPT5.
    
 0.594
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.