STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGTBSmall glutamine-rich tetratricopeptide repeat-containing protein beta. (304 aa)    
Predicted Functional Partners:
LEO1
RNA polymerase-associated protein LEO1.
    
 0.845
GET3
Arsenite/tail-anchored protein-transporting ATPase.
   
 0.813
GET4
Golgi to ER traffic protein 4 homolog isoform X1.
   
 0.807
BAG6
Large proline-rich protein BAG6 isoform X1.
   
 0.675
STX5
Syntaxin 5.
    
 0.595
SEC61B
Protein transport protein SEC61 subunit beta.
   
 0.585
ENSPCIP00000023921
annotation not available
   
 0.585
RAD23B
UV excision repair protein RAD23 homolog B isoform X1.
   
 0.583
ENSPCIP00000015824
annotation not available
   
 0.583
RAD23A
UV excision repair protein RAD23 homolog A isoform X1.
   
 0.583
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.