STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000048062E3 ubiquitin-protein ligase DTX3L-like. (443 aa)    
Predicted Functional Partners:
DTX3
Probable E3 ubiquitin-protein ligase DTX3 isoform X1.
 
      0.717
NOTCH2
LOW QUALITY PROTEIN: neurogenic locus notch homolog protein 2.
    
 0.693
NOTCH4
Neurogenic locus notch homolog protein 4.
    
 0.682
NOTCH3
Neurogenic locus notch homolog protein 3 isoform X1.
    
 0.681
NOTCH1
LOW QUALITY PROTEIN: neurogenic locus notch homolog protein 1.
    
 0.673
PARP9
Poly [ADP-ribose] polymerase 9 isoform X1.
   
 0.513
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.