STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENKD1LOW QUALITY PROTEIN: enkurin domain-containing protein 1. (375 aa)    
Predicted Functional Partners:
XRCC1
X-ray repair cross complementing 1.
   
 0.807
LIG1
DNA ligase 1.
  
 0.693
FEN1
Flap endonuclease 1.
   
 0.663
LIG4
DNA ligase 4.
  
 0.645
XRCC6
X-ray repair cross-complementing protein 6 isoform X1.
    
 0.601
LIG3
DNA ligase 3 isoform X1.
  
 0.587
EXO1
Exonuclease 1.
   
 0.578
POLD1
DNA polymerase delta catalytic subunit isoform X1.
   
 0.574
REC114
Meiotic recombination protein REC114.
    
 0.572
PNKP
Polynucleotide kinase 3'-phosphatase.
    
 0.572
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.