STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP10BProbable phospholipid-transporting ATPase VB isoform X1. (1455 aa)    
Predicted Functional Partners:
TMEM30A
Cell cycle control protein 50A.
   
 0.514
TMEM30B
Transmembrane protein 30B.
   
 0.514
ENSPCIP00000053041
annotation not available
   
 0.514
IKZF3
Zinc finger protein Aiolos isoform X1.
    
 0.466
PLN
Cardiac phospholamban.
    
 0.464
OSTF1
Osteoclast-stimulating factor 1.
   
 
 0.461
PTPRS
Receptor-type tyrosine-protein phosphatase S isoform X1.
     
 0.461
FXYD2
Sodium/potassium-transporting ATPase subunit gamma isoform X1.
    
 0.420
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.