STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPM1FProtein phosphatase 1F isoform X1. (450 aa)    
Predicted Functional Partners:
MTFMT
Methionyl-tRNA formyltransferase, mitochondrial isoform X1.
  
   0.524
NSUN2
TRNA (cytosine(34)-C(5))-methyltransferase.
  
  
 0.516
FGD1
FYVE, RhoGEF and PH domain-containing protein 1.
      
 0.515
ZFAND6
AN1-type zinc finger protein 6.
      
 0.506
WIPF1
WAS/WASL-interacting protein family member 1.
      
 0.493
FEM1C
Protein fem-1 homolog C.
   
 
 0.484
FEM1A
Protein fem-1 homolog A.
   
 
 0.484
ENSPCIP00000031238
annotation not available
   
 
 0.484
CUL2
Cullin 2.
      
 0.483
MED31
Mediator of RNA polymerase II transcription subunit 31.
    
   0.461
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.