STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMND5AE3 ubiquitin-protein transferase RMND5. (391 aa)    
Predicted Functional Partners:
GID8
Glucose-induced degradation protein 8 homolog.
    
 
 0.957
RANBP9
Ran-binding protein 9/10.
   
 
 0.940
WDR26
WD repeat-containing protein 26.
  
 
 0.937
RANBP10
Ran-binding protein 10 isoform X1.
   
 
 0.872
YPEL5
Protein yippee-like 5.
    
 
 0.846
GID4
LOW QUALITY PROTEIN: glucose-induced degradation protein 4 homolog.
    
 
 0.835
MKLN1
Muskelin isoform X1.
    
 
 0.833
ZMYND19
Zinc finger MYND domain-containing protein 19.
    
 
 0.817
ARMC8
Armadillo repeat-containing protein 8 isoform X1.
    
 
 0.748
ENSPCIP00000007751
annotation not available
    
 
 0.748
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.