STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATAT1Alpha-tubulin N-acetyltransferase 1 isoform X1. (571 aa)    
Predicted Functional Partners:
HDAC6
Histone deacetylase 6 isoform X1.
   
  
 0.581
TTLL5
Tubulin polyglutamylase TTLL5 isoform X1.
   
  
 0.572
SIRT2
Sirtuin 2.
      
 0.560
CUNH6orf58
Protein LEG1 homolog.
      
 0.558
NANOS3
Nanos homolog 3.
      
 0.499
TTLL4
Tubulin polyglutamylase TTLL4 isoform X1.
      
 0.493
MSH5
MutS protein homolog 5 isoform X1.
      
 0.461
SYCE2
Synaptonemal complex central element protein 2.
      
 0.420
EEF1AKNMT
Methyltransferase-like protein 13 isoform X1.
      
 0.418
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.