STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIAO1Probable cytosolic iron-sulfur protein assembly protein CIAO1. (339 aa)    
Predicted Functional Partners:
CIAO2B
Mitotic spindle-associated MMXD complex subunit MIP18.
    
 0.997
MMS19
MMS19 nucleotide excision repair protein homolog isoform X1.
    
 0.987
ENSPCIP00000012801
annotation not available
    
 0.937
FAM96A
MIP18 family protein FAM96A.
    
 0.937
ERCC2
TFIIH basal transcription factor complex helicase XPD subunit isoform X1.
    
 0.833
NARF
Nuclear prelamin A recognition factor isoform X1.
    
 0.748
CIAO3
Cytosolic Fe-S cluster assembly factor NARFL isoform X1.
    
 0.748
ENSPCIP00000053857
annotation not available
    
 0.748
CIAPIN1
Anamorsin isoform X1.
      
 0.703
GBF1
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1.
      
 0.703
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.