STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM147Transmembrane protein 147. (225 aa)    
Predicted Functional Partners:
NCLN
Nicalin isoform X1.
    
 
 0.936
TMCO1
Calcium load-activated calcium channel.
   
 
 0.919
CCDC47
Coiled-coil domain-containing protein 47.
    
 
 0.919
LIN52
Protein lin-52 homolog isoform X1.
   
 0.826
LIN9
Protein lin-9 homolog isoform X1.
    
 0.814
SEC61A1
Protein transport protein SEC61 subunit alpha.
   
 
 0.758
SEC61A2
Protein transport protein Sec61 subunit alpha isoform X1.
   
 
 0.758
RPL4
Large subunit ribosomal protein L4e.
   
   0.747
RPL5
60S ribosomal protein L5 isoform X1.
    
   0.739
RPL6
Large subunit ribosomal protein L6e.
   
   0.734
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.