STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARID3AAT-rich interactive domain-containing protein 3A. (677 aa)    
Predicted Functional Partners:
SMARCB1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.
    
 
 0.606
PBRM1
Protein polybromo-1 isoform X1.
   
 
 0.584
SMARCD2
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D.
   
 
 0.525
WDR18
Pre-rRNA-processing protein IPI3.
 
  
 
 0.513
TP53
Cellular tumor antigen p53.
    
 0.503
ARID3B
AT-rich interactive domain-containing protein 3B.
  
  
0.489
MYSM1
Histone H2A deubiquitinase MYSM1 isoform X1.
   
 
 0.484
SAP30L
Histone deacetylase complex subunit SAP30L.
    
 0.476
SAP30
LOW QUALITY PROTEIN: histone deacetylase complex subunit SAP30.
    
 0.476
SAP18
Histone deacetylase complex subunit SAP18.
     
 0.467
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.