STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPHKAPA-kinase anchor protein SPHKAP isoform X1. (1719 aa)    
Predicted Functional Partners:
PLBD1
Phospholipase B-like 1 isoform X1.
      
 0.657
C4BPB
Complement component 4 binding protein beta.
      
 0.656
SPHK1
Sphingosine kinase 1 isoform X1.
    
 
 0.580
VRK1
Serine/threonine-protein kinase VRK1 isoform X1.
   
  
 0.566
OSBP
Oxysterol-binding protein 1.
   
  
 0.564
CDKL4
Cyclin-dependent kinase-like 4.
   
  
 0.520
PTPN2
Tyrosine-protein phosphatase non-receptor type 2 isoform X1.
   
  
 0.466
PLBD2
Putative phospholipase B-like 2.
      
 0.426
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.