STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP1Ubiquitin specific peptidase 1. (810 aa)    
Predicted Functional Partners:
WDR48
LOW QUALITY PROTEIN: WD repeat-containing protein 48.
   
 0.998
FANCD2
LOW QUALITY PROTEIN: Fanconi anemia group D2 protein.
    
 0.978
FANCI
Fanconi anemia group I protein.
   
 0.976
PCNA
Proliferating cell nuclear antigen.
   
  0.888
UBC
LOW QUALITY PROTEIN: polyubiquitin-C.
    
 0.825
ENSPCIP00000043051
LOW QUALITY PROTEIN: polyubiquitin-C-like.
    
 0.825
RAD18
E3 ubiquitin-protein ligase RAD18 isoform X1.
   
 
 0.802
WDR20
WD repeat-containing protein 20.
   
 0.765
DMWD
Dystrophia myotonica WD repeat-containing protein.
   
 0.765
RPS27A
Ubiquitin-small subunit ribosomal protein S27Ae.
    
 0.761
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.