STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB44Ras-related protein Rab-44 isoform X1. (3189 aa)    
Predicted Functional Partners:
DYNC1LI1
Cytoplasmic dynein 1 light intermediate chain 1.
    
 0.579
DYNC1LI2
Cytoplasmic dynein 1 light intermediate chain 2.
    
 0.579
RABGGTB
Geranylgeranyl transferase type-2 subunit beta.
    
 0.556
EXOC1
Exocyst complex component 1 isoform X1.
   
 0.552
EXOC4
Exocyst complex component 4 isoform X1.
    
 0.552
RAB3IP
LOW QUALITY PROTEIN: rab-3A-interacting protein.
    
 0.550
RAB3IL1
RAB3A interacting protein like 1.
    
 0.550
SYTL2
Synaptotagmin-like protein 2 isoform X1.
    
 
 0.533
EXOC2
Exocyst complex component 2 isoform X1.
    
 0.516
ENSPCIP00000018163
annotation not available
    
 
 0.512
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.