STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS29Vacuolar protein sorting-associated protein 29 isoform X1. (238 aa)    
Predicted Functional Partners:
VPS35
LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 35.
   
 0.992
VPS26A
Vacuolar protein sorting-associated protein 26A isoform X1.
   
 0.960
VPS26B
Vacuolar protein sorting-associated protein 26B.
   
 0.939
TBC1D5
TBC1 domain family member 5.
    
 
 0.936
SNX1
Sorting nexin-1/2.
   
 
 0.922
SNX2
Sorting nexin-2 isoform X1.
   
 
 0.881
ITPA
Inosine triphosphate pyrophosphatase.
  
  
 0.820
VPS26C
Down syndrome critical region protein 3.
   
 
 0.796
SNX27
Sorting nexin-27 isoform X1.
    
 
 0.732
ANKRD27
Ankyrin repeat domain-containing protein 27 isoform X1.
    
 
 0.727
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.