STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AREL1Apoptosis-resistant E3 ubiquitin protein ligase 1 isoform X1. (823 aa)    
Predicted Functional Partners:
TRIP12
E3 ubiquitin-protein ligase TRIP12 isoform X1.
   
 
0.827
UBE2D1
Ubiquitin-conjugating enzyme E2 D1.
    
 0.563
ENSPCIP00000002547
annotation not available
   
 0.556
ENSPCIP00000005738
annotation not available
   
 0.556
ENSPCIP00000008252
annotation not available
   
 0.556
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
   
 0.556
ENSPCIP00000014246
annotation not available
   
 0.556
ENSPCIP00000039865
annotation not available
   
 0.556
TRRAP
LOW QUALITY PROTEIN: transformation/transcription domain-associated protein.
   
 
 0.515
MTX2
Metaxin-2 isoform X1.
    
 
 0.488
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.