STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMUB1Transmembrane and ubiquitin-like domain-containing protein 1. (245 aa)    
Predicted Functional Partners:
ERLIN2
Erlin-2 isoform X1.
    
 
 0.773
TMEM126A
Transmembrane protein 126A isoform X1.
      
 0.676
ERLIN1
Erlin-1 isoform X1.
    
 
 0.603
C6orf120
UPF0669 protein C6orf120 homolog.
      
 0.577
FAM8A1
Protein FAM8A1.
      
 0.563
FAM3C
Protein FAM3C.
   
  
 0.553
TMEM259
Transmembrane protein 259.
    
 
 0.545
TMUB2
Transmembrane and ubiquitin-like domain-containing protein 2 isoform X1.
  
 
 
0.515
UBE2J1
LOW QUALITY PROTEIN: ubiquitin-conjugating enzyme E2 J1.
   
  
 0.506
RNF5
E3 ubiquitin-protein ligase RNF5.
    
 
 0.447
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.