STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LTBP3Latent-transforming growth factor beta-binding protein 3 isoform X1. (108 aa)    
Predicted Functional Partners:
ENSPCIP00000046957
annotation not available
 
      0.899
TGFB1
Transforming growth factor beta-1.
   
 0.820
TGFB2
LOW QUALITY PROTEIN: transforming growth factor beta-2.
   
 0.758
TGFB3
Transforming growth factor beta-3.
   
 0.701
ITGB6
Integrin beta 6.
    
 0.556
ENSPCIP00000014454
LOW QUALITY PROTEIN: muscle M-line assembly protein unc-89-like.
   
 0.476
RBPJ
Recombining binding protein suppressor of hairless isoform X1.
    
 0.443
RBPJL
LOW QUALITY PROTEIN: recombining binding protein suppressor of hairless-like protein.
    
 0.443
MAZ
Myc-associated zinc finger protein isoform X1.
  
 
 0.423
MSTN
Growth/differentiation factor 8 isoform X1.
    
 0.407
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.