STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000054541annotation not available (219 aa)    
Predicted Functional Partners:
GEMIN7
Gem associated protein 7.
    
 
 0.788
DDX20
LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX20.
    
 
 0.743
GEMIN2
Gem associated protein 2.
    
 
 0.742
GEMIN8
Gem associated protein 8.
    
 
 0.660
SMAD7
Mothers against decapentaplegic homolog 7.
    
 0.643
TGFBR2
TGF-beta receptor type-2.
    
 0.577
CSDE1
Cold shock domain-containing protein E1 isoform X1.
    
 
 0.573
DERA
Deoxyribose-phosphate aldolase.
 
      0.561
GEMIN5
Gem associated protein 5.
    
 
 0.560
DNAJA2
DnaJ homolog subfamily A member 2.
   
    0.534
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.