STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK14932.1PAC2 family protein. (313 aa)    
Predicted Functional Partners:
SDK14860.1
tRNA (adenine-58-N(1)-) methyltransferase; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.
 
     0.758
SDK14893.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
 
     0.723
SDK14772.1
Proteasome accessory factor B.
 
     0.601
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.596
SDK01351.1
MerR family regulatory protein.
  
     0.569
SDK81251.1
Putative hydrolase.
  
   
 0.563
SDK14812.1
Peptidylprolyl isomerase.
       0.485
SDK14612.1
ATP-dependent RNA helicase HelY.
 
     0.473
SDK58210.1
Protein of unknown function.
   
    0.470
SDK74290.1
Nitroimidazol reductase NimA, pyridoxamine 5'-phosphate oxidase superfamily.
   
    0.470
Your Current Organism:
Cryobacterium psychrotolerans
NCBI taxonomy Id: 386301
Other names: C. psychrotolerans, CGMCC 1.5382, Cryobacterium psychrotolerans Zhang et al. 2007, Cryobacterium sp. 0549, JCM 13925, strain 0549
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.