STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilMType IV pilus assembly protein PilM. (349 aa)    
Predicted Functional Partners:
SDK29117.1
Hypothetical protein.
 
 0.998
SDK29092.1
Tfp pilus assembly protein PilO.
 
 
 0.993
SDK29309.1
Type IV pilus assembly protein PilC.
 
 
 
 0.978
SDK29385.1
Type IV pilus assembly protein PilB.
 
 
 
 0.975
SDK29173.1
Leader peptidase (prepilin peptidase) / N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.936
SDK29342.1
Twitching motility protein PilT.
 
   
 0.903
SDK29288.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
 
  
 0.900
SDK29203.1
Tfp pilus assembly protein PilX.
     
 0.806
SDK29254.1
Hypothetical protein.
       0.746
SDK29229.1
Hypothetical protein.
       0.745
Your Current Organism:
Cryobacterium psychrotolerans
NCBI taxonomy Id: 386301
Other names: C. psychrotolerans, CGMCC 1.5382, Cryobacterium psychrotolerans Zhang et al. 2007, Cryobacterium sp. 0549, JCM 13925, strain 0549
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.