STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK24803.1WXG100 family type VII secretion target; Belongs to the WXG100 family. (96 aa)    
Predicted Functional Partners:
SDK06136.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
 
 
 
 0.990
SDK75626.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
   
 
 0.905
SDK38888.1
Hypothetical protein.
  
     0.765
SDK50085.1
MinD-like ATPase involved in chromosome partitioning or flagellar assembly.
  
 
 
 0.756
SDK50121.1
Hypothetical protein.
  
     0.753
SDK82022.1
Hypothetical protein.
  
     0.752
SDL11071.1
Putative Flp pilus-assembly TadE/G-like.
  
     0.743
SDK50195.1
Hypothetical protein.
  
     0.737
SDL11009.1
TadE-like protein.
  
     0.707
SDL10881.1
Tight adherence protein B.
  
     0.700
Your Current Organism:
Cryobacterium psychrotolerans
NCBI taxonomy Id: 386301
Other names: C. psychrotolerans, CGMCC 1.5382, Cryobacterium psychrotolerans Zhang et al. 2007, Cryobacterium sp. 0549, JCM 13925, strain 0549
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.