STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK80849.1Uncharacterized conserved protein YafD, endonuclease/exonuclease/phosphatase (EEP) superfamily. (353 aa)    
Predicted Functional Partners:
SDK62611.1
Hypothetical protein.
  
     0.731
SDK35096.1
Hypothetical protein.
  
     0.605
SDK80887.1
Hypothetical protein.
       0.574
SDK84884.1
Hypothetical protein.
  
     0.555
SDK70792.1
Hypothetical protein.
  
     0.530
SDK80818.1
Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family.
       0.506
SDK49761.1
Mycothiol system anti-sigma-R factor.
  
     0.477
SDK45984.1
Helicase/secretion neighborhood TadE-like protein.
  
     0.468
SDK75349.1
Probable phosphoglycerate mutase.
  
     0.448
SDJ90184.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
     0.438
Your Current Organism:
Cryobacterium psychrotolerans
NCBI taxonomy Id: 386301
Other names: C. psychrotolerans, CGMCC 1.5382, Cryobacterium psychrotolerans Zhang et al. 2007, Cryobacterium sp. 0549, JCM 13925, strain 0549
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.