Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDJ83118.1 | SDK89069.1 | SAMN05216282_10119 | SAMN05216282_1173 | Predicted naringenin-chalcone synthase. | Hypothetical protein. | 0.666 |
SDJ83118.1 | SDL01046.1 | SAMN05216282_10119 | SAMN05216282_12243 | Predicted naringenin-chalcone synthase. | Metallo-beta-lactamase family protein. | 0.845 |
SDJ83118.1 | rpoA | SAMN05216282_10119 | SAMN05216282_104161 | Predicted naringenin-chalcone synthase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.850 |
SDJ83118.1 | rpoB | SAMN05216282_10119 | SAMN05216282_104211 | Predicted naringenin-chalcone synthase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.928 |
SDJ83118.1 | rpoZ | SAMN05216282_10119 | SAMN05216282_103224 | Predicted naringenin-chalcone synthase. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.899 |
SDK35269.1 | SDK49179.1 | SAMN05216282_10578 | SAMN05216282_1074 | DNA polymerase-1. | WD domain-containing protein, G-beta repeat-containing protein. | 0.420 |
SDK35269.1 | SDL01046.1 | SAMN05216282_10578 | SAMN05216282_12243 | DNA polymerase-1. | Metallo-beta-lactamase family protein. | 0.759 |
SDK35269.1 | polA | SAMN05216282_10578 | SAMN05216282_103199 | DNA polymerase-1. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.917 |
SDK35269.1 | rpoB | SAMN05216282_10578 | SAMN05216282_104211 | DNA polymerase-1. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.446 |
SDK35269.1 | sbcD | SAMN05216282_10578 | SAMN05216282_101103 | DNA polymerase-1. | Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.973 |
SDK49179.1 | SDK35269.1 | SAMN05216282_1074 | SAMN05216282_10578 | WD domain-containing protein, G-beta repeat-containing protein. | DNA polymerase-1. | 0.420 |
SDK49179.1 | SDK89069.1 | SAMN05216282_1074 | SAMN05216282_1173 | WD domain-containing protein, G-beta repeat-containing protein. | Hypothetical protein. | 0.951 |
SDK49179.1 | SDL01046.1 | SAMN05216282_1074 | SAMN05216282_12243 | WD domain-containing protein, G-beta repeat-containing protein. | Metallo-beta-lactamase family protein. | 0.970 |
SDK49179.1 | polA | SAMN05216282_1074 | SAMN05216282_103199 | WD domain-containing protein, G-beta repeat-containing protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.420 |
SDK49179.1 | rpoA | SAMN05216282_1074 | SAMN05216282_104161 | WD domain-containing protein, G-beta repeat-containing protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.824 |
SDK49179.1 | rpoB | SAMN05216282_1074 | SAMN05216282_104211 | WD domain-containing protein, G-beta repeat-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.863 |
SDK49179.1 | rpoZ | SAMN05216282_1074 | SAMN05216282_103224 | WD domain-containing protein, G-beta repeat-containing protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.814 |
SDK87371.1 | SDL01046.1 | SAMN05216282_1169 | SAMN05216282_12243 | Phosphotransacetylase. | Metallo-beta-lactamase family protein. | 0.788 |
SDK89069.1 | SDJ83118.1 | SAMN05216282_1173 | SAMN05216282_10119 | Hypothetical protein. | Predicted naringenin-chalcone synthase. | 0.666 |
SDK89069.1 | SDK49179.1 | SAMN05216282_1173 | SAMN05216282_1074 | Hypothetical protein. | WD domain-containing protein, G-beta repeat-containing protein. | 0.951 |
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