STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL10519.1Uncharacterized membrane protein YckC, RDD family. (278 aa)    
Predicted Functional Partners:
SDL10492.1
Uncharacterized membrane protein SpoIIM, required for sporulation.
 
    0.943
SDK50914.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
    0.786
SDK50774.1
Hypothetical protein.
 
     0.783
SDK50849.1
Hypothetical protein.
 
    0.779
SDK50814.1
Protein of unknown function.
 
    0.778
SDK00851.1
Heat shock protein Hsp15.
   
    0.662
SDJ99868.1
Flagellar basal-body rod protein FlgC.
    
   0.598
SDK51080.1
Glycosyltransferase, GT2 family.
  
     0.524
SDK51046.1
Hypothetical protein.
  
     0.468
SDL06596.1
CheA signal transduction histidine kinase.
   
   0.437
Your Current Organism:
Cryobacterium psychrotolerans
NCBI taxonomy Id: 386301
Other names: C. psychrotolerans, CGMCC 1.5382, Cryobacterium psychrotolerans Zhang et al. 2007, Cryobacterium sp. 0549, JCM 13925, strain 0549
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.