Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK61832.1 | ABK62318.1 | NT01CX_0169 | NT01CX_0170 | ISBma2, transposase. | Hypothetical UPF0145 protein; Identified by match to protein family HMM PF01906; Belongs to the UPF0145 family. | 0.436 |
ABK62032.1 | ABK62318.1 | NT01CX_0172 | NT01CX_0170 | Oxygen-independent coproporphyrinogen III oxidase, Fe-S oxidoreductase; Identified by match to protein family HMM PF04055. | Hypothetical UPF0145 protein; Identified by match to protein family HMM PF01906; Belongs to the UPF0145 family. | 0.409 |
ABK62032.1 | ABK62319.1 | NT01CX_0172 | NT01CX_0171 | Oxygen-independent coproporphyrinogen III oxidase, Fe-S oxidoreductase; Identified by match to protein family HMM PF04055. | ABC transport protein, putative. | 0.551 |
ABK62318.1 | ABK61832.1 | NT01CX_0170 | NT01CX_0169 | Hypothetical UPF0145 protein; Identified by match to protein family HMM PF01906; Belongs to the UPF0145 family. | ISBma2, transposase. | 0.436 |
ABK62318.1 | ABK62032.1 | NT01CX_0170 | NT01CX_0172 | Hypothetical UPF0145 protein; Identified by match to protein family HMM PF01906; Belongs to the UPF0145 family. | Oxygen-independent coproporphyrinogen III oxidase, Fe-S oxidoreductase; Identified by match to protein family HMM PF04055. | 0.409 |
ABK62318.1 | ABK62319.1 | NT01CX_0170 | NT01CX_0171 | Hypothetical UPF0145 protein; Identified by match to protein family HMM PF01906; Belongs to the UPF0145 family. | ABC transport protein, putative. | 0.546 |
ABK62319.1 | ABK62032.1 | NT01CX_0171 | NT01CX_0172 | ABC transport protein, putative. | Oxygen-independent coproporphyrinogen III oxidase, Fe-S oxidoreductase; Identified by match to protein family HMM PF04055. | 0.551 |
ABK62319.1 | ABK62318.1 | NT01CX_0171 | NT01CX_0170 | ABC transport protein, putative. | Hypothetical UPF0145 protein; Identified by match to protein family HMM PF01906; Belongs to the UPF0145 family. | 0.546 |