Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK60639.1 | ABK62085.1 | NT01CX_1499 | NT01CX_0044 | Pyrimidine-nucleoside phosphorylase; Identified by match to protein family HMM PF00591; match to protein family HMM PF02885. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.978 |
| ABK60639.1 | ABK62217.1 | NT01CX_1499 | NT01CX_1498 | Pyrimidine-nucleoside phosphorylase; Identified by match to protein family HMM PF00591; match to protein family HMM PF02885. | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.982 |
| ABK60639.1 | ABK62510.1 | NT01CX_1499 | NT01CX_0541 | Pyrimidine-nucleoside phosphorylase; Identified by match to protein family HMM PF00591; match to protein family HMM PF02885. | Cytidine and deoxycytidylate deaminase family protein; Identified by match to protein family HMM PF00383. | 0.556 |
| ABK60639.1 | deoD | NT01CX_1499 | NT01CX_2329 | Pyrimidine-nucleoside phosphorylase; Identified by match to protein family HMM PF00591; match to protein family HMM PF02885. | Purine nucleoside phosphorylase; Identified by match to protein family HMM PF01048; match to protein family HMM TIGR00107. | 0.930 |
| ABK60639.1 | tdk | NT01CX_1499 | NT01CX_0551 | Pyrimidine-nucleoside phosphorylase; Identified by match to protein family HMM PF00591; match to protein family HMM PF02885. | Thymidine kinase; Identified by match to protein family HMM PF00265. | 0.922 |
| ABK60938.1 | prfA | NT01CX_0550 | NT01CX_0548 | Conserved hypothetical protein; Identified by match to protein family HMM PF07136. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.663 |
| ABK60938.1 | tdk | NT01CX_0550 | NT01CX_0551 | Conserved hypothetical protein; Identified by match to protein family HMM PF07136. | Thymidine kinase; Identified by match to protein family HMM PF00265. | 0.799 |
| ABK62085.1 | ABK60639.1 | NT01CX_0044 | NT01CX_1499 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Pyrimidine-nucleoside phosphorylase; Identified by match to protein family HMM PF00591; match to protein family HMM PF02885. | 0.978 |
| ABK62085.1 | ABK62217.1 | NT01CX_0044 | NT01CX_1498 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.934 |
| ABK62085.1 | deoD | NT01CX_0044 | NT01CX_2329 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Purine nucleoside phosphorylase; Identified by match to protein family HMM PF01048; match to protein family HMM TIGR00107. | 0.929 |
| ABK62085.1 | tdk | NT01CX_0044 | NT01CX_0551 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Thymidine kinase; Identified by match to protein family HMM PF00265. | 0.929 |
| ABK62217.1 | ABK60639.1 | NT01CX_1498 | NT01CX_1499 | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Pyrimidine-nucleoside phosphorylase; Identified by match to protein family HMM PF00591; match to protein family HMM PF02885. | 0.982 |
| ABK62217.1 | ABK62085.1 | NT01CX_1498 | NT01CX_0044 | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.934 |
| ABK62217.1 | deoD | NT01CX_1498 | NT01CX_2329 | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Purine nucleoside phosphorylase; Identified by match to protein family HMM PF01048; match to protein family HMM TIGR00107. | 0.924 |
| ABK62217.1 | tdk | NT01CX_1498 | NT01CX_0551 | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Thymidine kinase; Identified by match to protein family HMM PF00265. | 0.906 |
| ABK62510.1 | ABK60639.1 | NT01CX_0541 | NT01CX_1499 | Cytidine and deoxycytidylate deaminase family protein; Identified by match to protein family HMM PF00383. | Pyrimidine-nucleoside phosphorylase; Identified by match to protein family HMM PF00591; match to protein family HMM PF02885. | 0.556 |
| ABK62510.1 | dut | NT01CX_0541 | NT01CX_0028 | Cytidine and deoxycytidylate deaminase family protein; Identified by match to protein family HMM PF00383. | Deoxyuridine 5triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.938 |
| ABK62510.1 | tdk | NT01CX_0541 | NT01CX_0551 | Cytidine and deoxycytidylate deaminase family protein; Identified by match to protein family HMM PF00383. | Thymidine kinase; Identified by match to protein family HMM PF00265. | 0.936 |
| ABK62510.1 | thyX | NT01CX_0541 | NT01CX_1095 | Cytidine and deoxycytidylate deaminase family protein; Identified by match to protein family HMM PF00383. | Thymidylate synthase, flavin-dependent; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | 0.925 |
| ABK62510.1 | tmk | NT01CX_0541 | NT01CX_0761 | Cytidine and deoxycytidylate deaminase family protein; Identified by match to protein family HMM PF00383. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.925 |
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