Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK60728.1 | ABK62654.1 | NT01CX_0806 | NT01CX_0807 | Conserved hypothetical protein. | MutT/nudix family protein, putative; Identified by match to protein family HMM PF00293. | 0.779 |
ABK60728.1 | sfsA | NT01CX_0806 | NT01CX_0808 | Conserved hypothetical protein. | Sugar fermentation stimulation protein; Identified by match to protein family HMM PF03749; match to protein family HMM TIGR00230; Belongs to the SfsA family. | 0.649 |
ABK62654.1 | ABK60728.1 | NT01CX_0807 | NT01CX_0806 | MutT/nudix family protein, putative; Identified by match to protein family HMM PF00293. | Conserved hypothetical protein. | 0.779 |
ABK62654.1 | sfsA | NT01CX_0807 | NT01CX_0808 | MutT/nudix family protein, putative; Identified by match to protein family HMM PF00293. | Sugar fermentation stimulation protein; Identified by match to protein family HMM PF03749; match to protein family HMM TIGR00230; Belongs to the SfsA family. | 0.691 |
proA | purD | NT01CX_0901 | NT01CX_2418 | Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | Phosphoribosylformylglycinamidine synthase; Identified by match to protein family HMM PF01071; match to protein family HMM PF02769; match to protein family HMM PF02842; match to protein family HMM PF02843; match to protein family HMM PF02844; match to protein family HMM TIGR00877; match to protein family HMM TIGR01857; Belongs to the GARS family. | 0.572 |
proA | sfsA | NT01CX_0901 | NT01CX_0808 | Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | Sugar fermentation stimulation protein; Identified by match to protein family HMM PF03749; match to protein family HMM TIGR00230; Belongs to the SfsA family. | 0.446 |
purD | proA | NT01CX_2418 | NT01CX_0901 | Phosphoribosylformylglycinamidine synthase; Identified by match to protein family HMM PF01071; match to protein family HMM PF02769; match to protein family HMM PF02842; match to protein family HMM PF02843; match to protein family HMM PF02844; match to protein family HMM TIGR00877; match to protein family HMM TIGR01857; Belongs to the GARS family. | Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.572 |
purD | sfsA | NT01CX_2418 | NT01CX_0808 | Phosphoribosylformylglycinamidine synthase; Identified by match to protein family HMM PF01071; match to protein family HMM PF02769; match to protein family HMM PF02842; match to protein family HMM PF02843; match to protein family HMM PF02844; match to protein family HMM TIGR00877; match to protein family HMM TIGR01857; Belongs to the GARS family. | Sugar fermentation stimulation protein; Identified by match to protein family HMM PF03749; match to protein family HMM TIGR00230; Belongs to the SfsA family. | 0.438 |
sfsA | ABK60728.1 | NT01CX_0808 | NT01CX_0806 | Sugar fermentation stimulation protein; Identified by match to protein family HMM PF03749; match to protein family HMM TIGR00230; Belongs to the SfsA family. | Conserved hypothetical protein. | 0.649 |
sfsA | ABK62654.1 | NT01CX_0808 | NT01CX_0807 | Sugar fermentation stimulation protein; Identified by match to protein family HMM PF03749; match to protein family HMM TIGR00230; Belongs to the SfsA family. | MutT/nudix family protein, putative; Identified by match to protein family HMM PF00293. | 0.691 |
sfsA | proA | NT01CX_0808 | NT01CX_0901 | Sugar fermentation stimulation protein; Identified by match to protein family HMM PF03749; match to protein family HMM TIGR00230; Belongs to the SfsA family. | Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.446 |
sfsA | purD | NT01CX_0808 | NT01CX_2418 | Sugar fermentation stimulation protein; Identified by match to protein family HMM PF03749; match to protein family HMM TIGR00230; Belongs to the SfsA family. | Phosphoribosylformylglycinamidine synthase; Identified by match to protein family HMM PF01071; match to protein family HMM PF02769; match to protein family HMM PF02842; match to protein family HMM PF02843; match to protein family HMM PF02844; match to protein family HMM TIGR00877; match to protein family HMM TIGR01857; Belongs to the GARS family. | 0.438 |