node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK60629.1 | ABK62134.1 | NT01CX_1084 | NT01CX_1091 | Transcription regulator ctsR; Identified by match to protein family HMM PF05848; Belongs to the CtsR family. | Membrane-associated protein; Contains a homolog of PilT-like; identified by match to protein family HMM PF01850; match to protein family HMM PF01938. | 0.458 |
ABK60629.1 | radA | NT01CX_1084 | NT01CX_1088 | Transcription regulator ctsR; Identified by match to protein family HMM PF05848; Belongs to the CtsR family. | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.615 |
ABK60784.1 | ABK61209.1 | NT01CX_1098 | NT01CX_1097 | RNA polymerase sigma-H factor; Identified by match to protein family HMM PF04542; Belongs to the sigma-70 factor family. | Conserved hypothetical protein; Identified by match to protein family HMM PF05991. | 0.802 |
ABK60784.1 | ABK61366.1 | NT01CX_1098 | NT01CX_1096 | RNA polymerase sigma-H factor; Identified by match to protein family HMM PF04542; Belongs to the sigma-70 factor family. | RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.745 |
ABK60784.1 | ABK61494.1 | NT01CX_1098 | NT01CX_1090 | RNA polymerase sigma-H factor; Identified by match to protein family HMM PF04542; Belongs to the sigma-70 factor family. | Conserved protein. | 0.423 |
ABK60784.1 | ABK62134.1 | NT01CX_1098 | NT01CX_1091 | RNA polymerase sigma-H factor; Identified by match to protein family HMM PF04542; Belongs to the sigma-70 factor family. | Membrane-associated protein; Contains a homolog of PilT-like; identified by match to protein family HMM PF01850; match to protein family HMM PF01938. | 0.561 |
ABK60784.1 | cysS | NT01CX_1098 | NT01CX_1093 | RNA polymerase sigma-H factor; Identified by match to protein family HMM PF04542; Belongs to the sigma-70 factor family. | cysteinyl-tRNA synthetase; Identified by match to protein family HMM PF01406; match to protein family HMM TIGR00435; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.575 |
ABK60784.1 | ispD | NT01CX_1098 | NT01CX_1092 | RNA polymerase sigma-H factor; Identified by match to protein family HMM PF04542; Belongs to the sigma-70 factor family. | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). | 0.470 |
ABK60784.1 | mrnC | NT01CX_1098 | NT01CX_1094 | RNA polymerase sigma-H factor; Identified by match to protein family HMM PF04542; Belongs to the sigma-70 factor family. | Uncharacterized conserved protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.744 |
ABK60784.1 | thyX | NT01CX_1098 | NT01CX_1095 | RNA polymerase sigma-H factor; Identified by match to protein family HMM PF04542; Belongs to the sigma-70 factor family. | Thymidylate synthase, flavin-dependent; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | 0.640 |
ABK61209.1 | ABK60784.1 | NT01CX_1097 | NT01CX_1098 | Conserved hypothetical protein; Identified by match to protein family HMM PF05991. | RNA polymerase sigma-H factor; Identified by match to protein family HMM PF04542; Belongs to the sigma-70 factor family. | 0.802 |
ABK61209.1 | ABK61366.1 | NT01CX_1097 | NT01CX_1096 | Conserved hypothetical protein; Identified by match to protein family HMM PF05991. | RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.963 |
ABK61209.1 | ABK62134.1 | NT01CX_1097 | NT01CX_1091 | Conserved hypothetical protein; Identified by match to protein family HMM PF05991. | Membrane-associated protein; Contains a homolog of PilT-like; identified by match to protein family HMM PF01850; match to protein family HMM PF01938. | 0.511 |
ABK61209.1 | cysS | NT01CX_1097 | NT01CX_1093 | Conserved hypothetical protein; Identified by match to protein family HMM PF05991. | cysteinyl-tRNA synthetase; Identified by match to protein family HMM PF01406; match to protein family HMM TIGR00435; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.890 |
ABK61209.1 | ispD | NT01CX_1097 | NT01CX_1092 | Conserved hypothetical protein; Identified by match to protein family HMM PF05991. | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). | 0.453 |
ABK61209.1 | mrnC | NT01CX_1097 | NT01CX_1094 | Conserved hypothetical protein; Identified by match to protein family HMM PF05991. | Uncharacterized conserved protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.963 |
ABK61209.1 | thyX | NT01CX_1097 | NT01CX_1095 | Conserved hypothetical protein; Identified by match to protein family HMM PF05991. | Thymidylate synthase, flavin-dependent; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | 0.773 |
ABK61366.1 | ABK60784.1 | NT01CX_1096 | NT01CX_1098 | RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | RNA polymerase sigma-H factor; Identified by match to protein family HMM PF04542; Belongs to the sigma-70 factor family. | 0.745 |
ABK61366.1 | ABK61209.1 | NT01CX_1096 | NT01CX_1097 | RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Conserved hypothetical protein; Identified by match to protein family HMM PF05991. | 0.963 |
ABK61366.1 | ABK61494.1 | NT01CX_1096 | NT01CX_1090 | RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Conserved protein. | 0.474 |