ABK61812.1 protein (Clostridium novyi) - STRING interaction network

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

ABK61812.1

Membrane protein, putative. (412 aa)

Predicted Functional Partners:

ABK60954.1

0.962

ABK61387.1

0.946

ABK61772.1

0.874

ABK62022.1

0.859

ABK60953.1

0.793

ABK60435.1

0.698

ABK61975.1

0.687

ABK61009.1

0.627

ABK61240.1

0.626

ABK62171.1

0.609

Your Current Organism:

Clostridium novyi

NCBI taxonomy Id: 386415
Other names: C. novyi NT, Clostridium novyi NT, Clostridium novyi str. NT, Clostridium novyi strain NT, Clostridium novyi-NT

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABK60435.1	ABK61009.1	NT01CX_1187	NT01CX_1305	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Lipoprotein, putative.	0.712
ABK60435.1	ABK61812.1	NT01CX_1187	NT01CX_1309	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Membrane protein, putative.	0.698
ABK60953.1	ABK61009.1	NT01CX_1176	NT01CX_1305	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Lipoprotein, putative.	0.806
ABK60953.1	ABK61387.1	NT01CX_1176	NT01CX_1307	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Membrane protein, putative.	0.528
ABK60953.1	ABK61812.1	NT01CX_1176	NT01CX_1309	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Membrane protein, putative.	0.793
ABK60953.1	ABK62022.1	NT01CX_1176	NT01CX_1306	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	RNA polymerase sigma-70 factor, ECF subfamily, putative; Identified by match to protein family HMM PF04542; Belongs to the sigma-70 factor family. ECF subfamily.	0.417
ABK60954.1	ABK61009.1	NT01CX_1308	NT01CX_1305	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	Lipoprotein, putative.	0.938
ABK60954.1	ABK61240.1	NT01CX_1308	NT01CX_1310	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC-type multidrug transport system, ATP-ase compoment CAC0241; Identified by match to protein family HMM PF00005.	0.514
ABK60954.1	ABK61387.1	NT01CX_1308	NT01CX_1307	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	Membrane protein, putative.	0.922
ABK60954.1	ABK61772.1	NT01CX_1308	NT01CX_1302	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.428
ABK60954.1	ABK61812.1	NT01CX_1308	NT01CX_1309	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	Membrane protein, putative.	0.962
ABK60954.1	ABK62022.1	NT01CX_1308	NT01CX_1306	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	RNA polymerase sigma-70 factor, ECF subfamily, putative; Identified by match to protein family HMM PF04542; Belongs to the sigma-70 factor family. ECF subfamily.	0.868
ABK61009.1	ABK60435.1	NT01CX_1305	NT01CX_1187	Lipoprotein, putative.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.712
ABK61009.1	ABK60953.1	NT01CX_1305	NT01CX_1176	Lipoprotein, putative.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.806
ABK61009.1	ABK60954.1	NT01CX_1305	NT01CX_1308	Lipoprotein, putative.	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	0.938
ABK61009.1	ABK61240.1	NT01CX_1305	NT01CX_1310	Lipoprotein, putative.	ABC-type multidrug transport system, ATP-ase compoment CAC0241; Identified by match to protein family HMM PF00005.	0.580
ABK61009.1	ABK61387.1	NT01CX_1305	NT01CX_1307	Lipoprotein, putative.	Membrane protein, putative.	0.922
ABK61009.1	ABK61772.1	NT01CX_1305	NT01CX_1302	Lipoprotein, putative.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.894
ABK61009.1	ABK61812.1	NT01CX_1305	NT01CX_1309	Lipoprotein, putative.	Membrane protein, putative.	0.627
ABK61009.1	ABK61975.1	NT01CX_1305	NT01CX_2013	Lipoprotein, putative.	ABC transporter (ATP-binding protein); Identified by match to protein family HMM PF00005.	0.702