Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK60520.1 | ABK60800.1 | NT01CX_1827 | NT01CX_1826 | Membrane associated protein. | Uncharacterized conserved protein; Similar to YTFJ B. subtilis. | 0.729 |
ABK60520.1 | ABK61887.1 | NT01CX_1827 | NT01CX_1828 | Membrane associated protein. | Identified by match to protein family HMM PF07670. | 0.517 |
ABK60800.1 | ABK60520.1 | NT01CX_1826 | NT01CX_1827 | Uncharacterized conserved protein; Similar to YTFJ B. subtilis. | Membrane associated protein. | 0.729 |
ABK60800.1 | ABK61887.1 | NT01CX_1826 | NT01CX_1828 | Uncharacterized conserved protein; Similar to YTFJ B. subtilis. | Identified by match to protein family HMM PF07670. | 0.419 |
ABK61630.1 | ABK61887.1 | NT01CX_1829 | NT01CX_1828 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM PF07670. | 0.494 |
ABK61806.1 | ABK61887.1 | NT01CX_0266 | NT01CX_1828 | Identified by match to protein family HMM PF03553. | Identified by match to protein family HMM PF07670. | 0.733 |
ABK61887.1 | ABK60520.1 | NT01CX_1828 | NT01CX_1827 | Identified by match to protein family HMM PF07670. | Membrane associated protein. | 0.517 |
ABK61887.1 | ABK60800.1 | NT01CX_1828 | NT01CX_1826 | Identified by match to protein family HMM PF07670. | Uncharacterized conserved protein; Similar to YTFJ B. subtilis. | 0.419 |
ABK61887.1 | ABK61630.1 | NT01CX_1828 | NT01CX_1829 | Identified by match to protein family HMM PF07670. | Hypothetical protein; Identified by Glimmer2; putative. | 0.494 |
ABK61887.1 | ABK61806.1 | NT01CX_1828 | NT01CX_0266 | Identified by match to protein family HMM PF07670. | Identified by match to protein family HMM PF03553. | 0.733 |
ABK61887.1 | spmB | NT01CX_1828 | NT01CX_0710 | Identified by match to protein family HMM PF07670. | Identified by match to protein family HMM PF07670. | 0.452 |
spmB | ABK61887.1 | NT01CX_0710 | NT01CX_1828 | Identified by match to protein family HMM PF07670. | Identified by match to protein family HMM PF07670. | 0.452 |