MPV17L2 protein (Alligator sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MPV17L2

Mpv17-like protein 2; Belongs to the peroxisomal membrane protein PXMP2/4 family. (164 aa)

Predicted Functional Partners:

MPV17L

0.915

MPV17

0.900

PEX19

0.720

PEX3

0.658

PEX16

0.654

SLC25A17

0.643

PEX13

0.628

LOC102386089

0.612

LOC102386341

0.612

PEX14

0.594

Your Current Organism:

Alligator sinensis

NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102386089	LOC102386341	A0A1U7S0E7	A0A1U8DAK8	enoyl-CoA delta isomerase 2, mitochondrial-like.	enoyl-CoA delta isomerase 2, mitochondrial-like.	0.941
LOC102386089	MPV17	A0A1U7S0E7	A0A3Q0FUK8	enoyl-CoA delta isomerase 2, mitochondrial-like.	Protein Mpv17; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.592
LOC102386089	MPV17L	A0A1U7S0E7	A0A1U8D4T5	enoyl-CoA delta isomerase 2, mitochondrial-like.	Mpv17-like protein; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.577
LOC102386089	MPV17L2	A0A1U7S0E7	A0A1U7RTE6	enoyl-CoA delta isomerase 2, mitochondrial-like.	Mpv17-like protein 2; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.612
LOC102386089	PEX13	A0A1U7S0E7	A0A3Q0FLP2	enoyl-CoA delta isomerase 2, mitochondrial-like.	Peroxisome biogenesis factor 13.	0.960
LOC102386089	PEX14	A0A1U7S0E7	A0A1U7RNN6	enoyl-CoA delta isomerase 2, mitochondrial-like.	Peroxisomal membrane protein PEX14 isoform X1.	0.955
LOC102386089	PEX16	A0A1U7S0E7	A0A1U8D9A4	enoyl-CoA delta isomerase 2, mitochondrial-like.	Peroxisomal membrane protein PEX16.	0.424
LOC102386089	PEX19	A0A1U7S0E7	A0A3Q0FW50	enoyl-CoA delta isomerase 2, mitochondrial-like.	Peroxisomal biogenesis factor 19.	0.542
LOC102386089	PEX3	A0A1U7S0E7	A0A1U8DIG4	enoyl-CoA delta isomerase 2, mitochondrial-like.	Peroxisomal biogenesis factor 3.	0.515
LOC102386089	SLC25A17	A0A1U7S0E7	A0A3Q0GY37	enoyl-CoA delta isomerase 2, mitochondrial-like.	Peroxisomal membrane protein PMP34; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.419
LOC102386341	LOC102386089	A0A1U8DAK8	A0A1U7S0E7	enoyl-CoA delta isomerase 2, mitochondrial-like.	enoyl-CoA delta isomerase 2, mitochondrial-like.	0.941
LOC102386341	MPV17	A0A1U8DAK8	A0A3Q0FUK8	enoyl-CoA delta isomerase 2, mitochondrial-like.	Protein Mpv17; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.592
LOC102386341	MPV17L	A0A1U8DAK8	A0A1U8D4T5	enoyl-CoA delta isomerase 2, mitochondrial-like.	Mpv17-like protein; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.577
LOC102386341	MPV17L2	A0A1U8DAK8	A0A1U7RTE6	enoyl-CoA delta isomerase 2, mitochondrial-like.	Mpv17-like protein 2; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.612
LOC102386341	PEX13	A0A1U8DAK8	A0A3Q0FLP2	enoyl-CoA delta isomerase 2, mitochondrial-like.	Peroxisome biogenesis factor 13.	0.960
LOC102386341	PEX14	A0A1U8DAK8	A0A1U7RNN6	enoyl-CoA delta isomerase 2, mitochondrial-like.	Peroxisomal membrane protein PEX14 isoform X1.	0.955
LOC102386341	PEX16	A0A1U8DAK8	A0A1U8D9A4	enoyl-CoA delta isomerase 2, mitochondrial-like.	Peroxisomal membrane protein PEX16.	0.424
LOC102386341	PEX19	A0A1U8DAK8	A0A3Q0FW50	enoyl-CoA delta isomerase 2, mitochondrial-like.	Peroxisomal biogenesis factor 19.	0.542
LOC102386341	PEX3	A0A1U8DAK8	A0A1U8DIG4	enoyl-CoA delta isomerase 2, mitochondrial-like.	Peroxisomal biogenesis factor 3.	0.515
LOC102386341	SLC25A17	A0A1U8DAK8	A0A3Q0GY37	enoyl-CoA delta isomerase 2, mitochondrial-like.	Peroxisomal membrane protein PMP34; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.419