STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MELTFOvotransferrin; Belongs to the transferrin family. (732 aa)    
Predicted Functional Partners:
TFRC
Transferrin receptor protein 1.
  
 0.569
TFR2
Transferrin receptor protein 2.
  
 0.569
EPO
Erythropoietin.
  
 0.569
CASK
Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.
   
 0.516
GLMN
Glomulin.
   
  0.409
UTP20
LOW QUALITY PROTEIN: small subunit processome component 20 homolog.
   
  0.409
RPS6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.409
WDR43
WD repeat-containing protein 43.
   
 0.407
RPS7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 0.403
EMG1
Ribosomal RNA small subunit methyltransferase NEP1.
   
  0.402
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.