STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FMNL1Formin-like protein 1 isoform X1. (1125 aa)    
Predicted Functional Partners:
CDC42
Cell division control protein 42 homolog isoform X1.
   
 0.818
NPHP4
Nephrocystin-4 isoform X1.
    
 0.743
RAC2
Ras-related C3 botulinum toxin substrate 2.
   
 0.602
RAC3
Ras-related C3 botulinum toxin substrate 3.
   
 0.602
LOC102384525
Ras-related C3 botulinum toxin substrate 1 isoform X1.
   
 0.602
RHOV
Rho-related GTP-binding protein RhoV.
   
 0.579
RHOG
Rho-related GTP-binding protein RhoG.
   
 0.579
RHOU
Rho-related GTP-binding protein RhoU.
   
 0.579
MYO9B
Unconventional myosin-IXb isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 
 0.541
RHOQ
Rho-related GTP-binding protein RhoQ.
   
 0.538
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.