STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MIGA1Mitoguardin 1. (601 aa)    
Predicted Functional Partners:
MIGA2
Mitoguardin 2 isoform X1.
    
 
0.725
NEXN
Nexilin isoform X1.
 
   
 0.715
PIGA
Phosphatidylinositol N-acetylglucosaminyltransferase subunit A.
      
 0.643
MFSD6
Major facilitator superfamily domain-containing protein 6 isoform X1.
      
 0.543
SURF6
Surfeit locus protein 6.
     
 0.499
PIGW
Phosphatidylinositol-glycan biosynthesis class W protein; Probable acetyltransferase, which acetylates the inositol ring of phosphatidylinositol during biosynthesis of GPI-anchor.
      
 0.483
UHMK1
Serine/threonine-protein kinase Kist isoform X1.
      
 0.480
CSGALNACT2
Hexosyltransferase.
      
 0.472
ADGRL4
Adhesion G protein-coupled receptor L4 isoform X1; Belongs to the G-protein coupled receptor 2 family.
      
 0.470
PAK1IP1
P21-activated protein kinase-interacting protein 1 isoform X1.
      
 0.429
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.