STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXO7F-box only protein 7 isoform X1. (531 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.784
PRKN
RBR-type E3 ubiquitin transferase.
    
 
 0.660
VPS35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.631
MRPL2
39S ribosomal protein L2, mitochondrial.
    
 0.588
PINK1
Serine/threonine-protein kinase PINK1, mitochondrial.
    
 
 0.577
CUL1
Cullin-1 isoform X1; Belongs to the cullin family.
    
 0.558
RIC3
Protein RIC-3.
    
 0.554
ATXN2
Ataxin-2 isoform X1.
    
 
 0.554
CUL3
Cullin-3 isoform X1; Belongs to the cullin family.
    
 0.551
SPG11
Spatacsin isoform X1.
      
 0.546
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.