STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPGMacrophage-capping protein. (351 aa)    
Predicted Functional Partners:
COG8
Conserved oligomeric Golgi complex subunit 8.
    
 
 0.606
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 
 0.586
COG3
Conserved oligomeric Golgi complex subunit 3 isoform X1.
    
 
 0.573
COG4
Conserved oligomeric Golgi complex subunit 4 isoform X1.
    
 
 0.555
CASK
Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.
    
  0.527
APLP2
Amyloid-like protein 2 isoform X1.
    
 0.510
WASL
Neural Wiskott-Aldrich syndrome protein.
    
 
 0.509
WAS
wiskott-Aldrich syndrome protein.
    
 
 0.509
ESPN
Espin.
   
 0.505
WHRN
Whirlin.
     
 0.503
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.