STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YKT6Synaptobrevin homolog YKT6 isoform X1; Belongs to the synaptobrevin family. (244 aa)    
Predicted Functional Partners:
STX5
Syntaxin-5; Belongs to the syntaxin family.
    
 0.999
SCFD1
Sec1 family domain-containing protein 1 isoform X1; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.998
GOSR2
Golgi SNAP receptor complex member 2 isoform X1; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
   
 0.998
GOSR1
Golgi SNAP receptor complex member 1.
    
 0.998
VTI1A
Vesicle transport through interaction with t-SNAREs homolog 1A isoform X1.
    
 0.998
BET1
BET1 homolog.
    
 0.997
STX7
Syntaxin-7 isoform X1; Belongs to the syntaxin family.
   
 0.995
BET1L
BET1-like protein.
    
 0.993
VTI1B
Vesicle transport through interaction with t-SNAREs homolog 1B.
    
 0.992
STX6
Syntaxin-6; Belongs to the syntaxin family.
    
 0.990
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
Server load: low (28%) [HD]